CDS

Accession Number TCMCG051C13541
gbkey CDS
Protein Id XP_024455360.1
Location complement(7003620..7005209)
Gene LOC7493571
GeneID 7493571
Organism Populus trichocarpa

Protein

Length 529aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024599592.1
Definition plant-specific TFIIB-related protein PTF2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription factor IIIB 50 kDa
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15196        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000126        [VIEW IN EMBL-EBI]
GO:0001016        [VIEW IN EMBL-EBI]
GO:0001032        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0001085        [VIEW IN EMBL-EBI]
GO:0001091        [VIEW IN EMBL-EBI]
GO:0001093        [VIEW IN EMBL-EBI]
GO:0001098        [VIEW IN EMBL-EBI]
GO:0001099        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006359        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009846        [VIEW IN EMBL-EBI]
GO:0009856        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034599        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070063        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090576        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCCTGCAAAGCTTGTGGGCTCAGAACCCTTATCAGGGACGATGCAACAGAGAACATGATATGTGATTCATGTGGTACAGTCCAGGATTTCGCCAACTATCAAGAACGTACCTTTAACATTAATGGGCCAACAGGTGTGTTTATAAGTATAGGCTCTTCAGGTTGTGGTAGTGTTTTGAATTATAGAGAGAAGAAGATTTATGAAGCAAATAATTTAATAGATGATATTGTTTTTAAGGTAGGGTTAACTGGTGGTTCAAAAGTTAGTGAAATTAGAGATATGATTAGTAAAGTTACTGATGGGGAGTTTGGTTCAAGTGAGAGTAGATGGTTTAGTATTTTTGTTGGTGCTTGTGTTTATGTTGTAATGAGGAATGGTGATAAAAGCTTGAGCATTGAGGAGGTGAGTAGTGTTGTTGGGTGTGATATTCATGAATTGGGGAGGATGGTCGTGAGGGTTGTTGAGCATTTGGGGATGAAGTTGCCAGGTTTTGATATAGTGGGCAGTTTTGAGAGGGTGGTTAGGAGTTTGTCGATTTCGGACAGGGTTGAGGGGGATGTGTTGGAGAGGATGAGGAAACAAGGTATTTTTTTAGTGCAATGTGCTGTGAAGTGGTTTTTGACTACAGGGAGGAGGCCGTTGCCGGTTGTTGTGGCTGTTTTGGCTTTGGTTGCTGAGTTGAATGGGGTGGAGGGGGTTAAGATCGAGGAGGTTGCCAGAGAGGTTCATGTAGCGGTGTCTACTTGTAGGTTGAGATACAAGGAATTGTTGGAGGTGATTGCTAAGGTAGCGCAAGAGATTTTGCCATGGGGGAAGGATGTAAATGTGAAGAATGCAGTGAAGAATGCGCCATTTGTGATTCGATATTTGGAGATGAAATGTATGTCGAAGAGTGGTGGGGAAAAAAAGGGTTTGGAGAGTACTGAGTTTGATTTGGGAGAAGTGGTTGGTGAGTATTTTAGTAAGAATGTTGTGGAGGATAGTTTGGAATGTGAGGATTTGCGGTATTTTGAGTTGGAAGATGCTATTGGGTTTGATAAGACTGGCATTGATGAGGCGGATAAGCTTCAGCTTTCACATGAATGCTTATCCATGGTTTATGACAAGTTCCTGATGGATGGTGGTTGTGGTAGATATATGGAAGAAAGTGGAAAGGTTCTTGGGAGGAAAAGGGAGAGAGAGCTTGAGATTCAGGCAACAGAATGGTGGAATGGAAAATCAGAGTTGAGCAAGAAGCTTTTGCTAAAACAGTTATTGGAGAAAGATATAGGATTTAGTGTTATGCCTCCATCTTTTGTCAATGGTTGTACAACAATTAAGAAGAGGAGAGCAAAGATAAATGCTGCAAAGCTGCGGATTGATAGGATTATGAATCCATGGAATACTGATTCAGGTAGTGGTAAAGTTTGCACTGTTGAAGGTGCACATGATCGGAAGAGGAAAAGAAAATCACTGGTAAAAGATATTGATTGGGAGGATTTTGTCATTGAGACCCTCCTTCTTCATCAGGTGAAAGAGGAGGAAATTGAGAAAGGGTATTACAACACCTTGATGGACTTGCATGTTTTCAATTCTGGTACTATGTGA
Protein:  
MSCKACGLRTLIRDDATENMICDSCGTVQDFANYQERTFNINGPTGVFISIGSSGCGSVLNYREKKIYEANNLIDDIVFKVGLTGGSKVSEIRDMISKVTDGEFGSSESRWFSIFVGACVYVVMRNGDKSLSIEEVSSVVGCDIHELGRMVVRVVEHLGMKLPGFDIVGSFERVVRSLSISDRVEGDVLERMRKQGIFLVQCAVKWFLTTGRRPLPVVVAVLALVAELNGVEGVKIEEVAREVHVAVSTCRLRYKELLEVIAKVAQEILPWGKDVNVKNAVKNAPFVIRYLEMKCMSKSGGEKKGLESTEFDLGEVVGEYFSKNVVEDSLECEDLRYFELEDAIGFDKTGIDEADKLQLSHECLSMVYDKFLMDGGCGRYMEESGKVLGRKRERELEIQATEWWNGKSELSKKLLLKQLLEKDIGFSVMPPSFVNGCTTIKKRRAKINAAKLRIDRIMNPWNTDSGSGKVCTVEGAHDRKRKRKSLVKDIDWEDFVIETLLLHQVKEEEIEKGYYNTLMDLHVFNSGTM